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Systems and methods for encoding image features of high-resolution digital images of biological specimens

專利號
US11176412B2
公開日期
2021-11-16
申請人
Ventana Medical Systems, Inc.(US AZ Tucson)
發(fā)明人
Yao Nie
IPC分類
G06K9/00; G06K9/62; G06T7/11; G06K9/46
技術領域
superpixel,image,clustering,centroid,clusters,in,cluster,vectors,vector,biological
地域: AZ AZ Tucson

摘要

An image analysis system for analyzing biological specimen images is disclosed. The system may include: a superpixel generator configured to obtain a biological specimen image and group pixels of the biological specimen image into a plurality of superpixels; a feature extractor configured to extract, from each superpixel in the plurality of superpixels, a feature vector comprising a plurality of image features; a clustering engine configured to assign the plurality of superpixels to a predefined number of clusters, each cluster being characterized by a centroid vector of feature vectors of superpixels assigned to the cluster; and a storage interface configured to store, for each superpixel in the plurality of superpixels, clustering information identifying the one cluster to which the superpixel is assigned. The system may also include a graph engine configured construct a graph based on the stored information, and use the graph to perform a graph-based image processing task.

說明書

For example, a pathologist may be interested in analyzing one region of interest of an image, and later in another region of interest in the same image, which may or may not overlap with the first region. In another example, the pathologist may want to compare one image with another image acquired for the same patient based on a new stain or morphology metric. In both examples, if the image features of the image are accessible without re-computing, the process for the new image analysis task can be significantly more efficient. In addition, for some image analysis tasks, image feature pre-computation can be indispensable to provide real-time user experience. For example, interactive image segmentation task may require the user to mark various image segments, to check the resulting segmentation, and to add additional marking to refine the segmentation. To enable this interactive process, the segmentation results after each marking need to be generated within seconds or fractions of a second. Accordingly, the amount of real-time re-computations needs to be minimized.

SUMMARY

權利要求

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